Laboratory reports of respiratory infections made to CIDSC from PHE and NHS laboratories in England and Wales: weeks 10 to 13, 2015
Updated 12 January 2016
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Data are recorded by week of report, but include only specimens taken in the last 8 weeks (ie recent specimens).
1. Table 1. Reports of influenza infection made to CIDSC, by week of report
| Week | Week 10 | Week 11 | Week 12 | Week 13 | Total |
|---|---|---|---|---|---|
| Week ending | 8/3/2015 | 15/3/2015 | 22/3/2015 | 29/3/2015 | |
| Influenza A | 178 | 283 | 124 | 171 | 756 |
| Isolation | 10 | 20 | 5 | 7 | 42 |
| DIF * | 23 | 7 | 4 | 2 | 36 |
| PCR | 117 | 232 | 92 | 143 | 584 |
| Other † | 28 | 24 | 23 | 19 | 94 |
| Influenza B | 83 | 125 | 79 | 149 | 436 |
| Isolation | 5 | 10 | 6 | 17 | 38 |
| DIF * | 6 | 9 | 3 | 5 | 23 |
| PCR | 67 | 95 | 62 | 120 | 344 |
| Other † | 5 | 11 | 8 | 7 | 31 |
* DIF = Direct Immunofluorescence.
† Other = “Antibody detection - single high titre” or “Method not specified”.
2. Table 2. Respiratory viral detections by any method (culture, direct immunofluorescence, PCR, four-fold rise in paired sera, single high serology titre, genomic, electron microscopy, other method, other method unknown), by week of report
| Week | Week 10 | Week 11 | Week 12 | Week 13 | Total |
|---|---|---|---|---|---|
| Week ending | 8/3/2015 | 15/3/2015 | 22/3/2015 | 29/3/2015 | |
| Adenovirus* | 74 | 116 | 81 | 95 | 366 |
| Coronavirus | 18 | 30 | 9 | 27 | 84 |
| Parainfluenza† | 66 | 94 | 105 | 87 | 352 |
| Rhinovirus | 111 | 183 | 149 | 140 | 583 |
| RSV | 95 | 115 | 84 | 94 | 388 |
* Respiratory samples only.
† Includes parainfluenza types 1, 2, 3, 4 and untyped.
3. Table 3. Respiratory viral detections by age group: weeks 10 to 13, 2015
| Age group (years) | <1 year | 1-4 years | 5-14 years | 15-44 years | 45-64 years | ≥65 years | Unknown | Total |
|---|---|---|---|---|---|---|---|---|
| Adenovirus * | 72 | 106 | 28 | 102 | 41 | 16 | 1 | 366 |
| Coronavirus | 16 | 13 | 1 | 16 | 18 | 20 | – | 84 |
| Influenza A | 11 | 32 | 16 | 95 | 130 | 238 | 1 | 523 |
| Influenza B | 11 | 27 | 50 | 147 | 162 | 135 | 2 | 534 |
| Parainfluenza † | 103 | 56 | 12 | 45 | 57 | 79 | – | 352 |
| Respiratory syncytial virus | 142 | 51 | 18 | 45 | 55 | 75 | 2 | 388 |
| Rhinovirus | 220 | 121 | 40 | 69 | 57 | 74 | 2 | 583 |
* Respiratory samples only.
† Includes parainfluenza types 1, 2, 3, 4 and untyped.
4. Table 4. Laboratory reports of infections associated with atypical pneumonia, by week of report
| Week | Week 10 | Week 11 | Week 12 | Week 13 | Total |
|---|---|---|---|---|---|
| Week ending | 8/3/2015 | 15/3/2015 | 22/3/2015 | 29/3/2015 | |
| Coxiella burnettii | – | – | – | – | – |
| Respiratory Chlamydia sp.* | 1 | 1 | – | – | 2 |
| Mycoplasma pneumoniae | 13 | 21 | 9 | – | 43 |
| Legionella sp. | 9 | 3 | 1 | – | 13 |
* Includes Chlamydia Psittaci, Chlamydia Pneumoniae, and Chlamydia sp detected from blood, serum, and respiratory specimens.
5. Table 5. Laboratory reports of Legionnaires Disease cases in England and Wales, by week of report
| Week | Week 10 | Week 11 | Week 12 | Week 13 | Total |
|---|---|---|---|---|---|
| Week ending | 8/3/2015 | 15/3/2015 | 22/3/2015 | 29/3/2015 | |
| Nosocomial | – | – | – | – | 0 |
| Community | 7 | 1 | – | – | 8 |
| Travel abroad | 2 | 2 | – | – | 4 |
| Travel UK | – | – | 1 | – | 1 |
| Total | 9 | 3 | 1 | – | 13 |
| Male | 7 | 2 | 1 | – | 10 |
| Female | 2 | 1 | – | – | 3 |
Thirteen cases were reported with pneumonia and one case had non-pneumonic infection. Eleven males aged 35 to 87 years and 3 females aged 38 to 67 years. Eight cases had community-acquired infection. Three deaths were reported in males aged 64 and 72.
Five cases were reported with travel association: Switzerland (1), Thailand (1), United Arab Emirates/United Kingdom (2) and United Kingdom (1).
6. Table 6. Laboratory reports of Legionnaires Disease cases in England and Wales, by PHE Centre: weeks 10 to 13, 2015
| Region/Country | Nosocomial | Community | Travel Abroad | Travel UK | Total |
|---|---|---|---|---|---|
| North of England | |||||
| North East | – | 1 | 1 | – | 2 |
| Cheshire & Merseyside | – | – | – | – | 0 |
| Greater Manchester | – | 1 | – | – | 1 |
| Cumbria & Lancashire | – | – | – | – | 0 |
| Yorkshire & the Humber | – | – | – | – | 0 |
| South of England | |||||
| Devon, Cornwall & Somerset | – | – | – | – | 0 |
| Avon, Gloucestershire & Wiltshire | – | 1 | – | 1 | 2 |
| Wessex | – | – | – | – | 0 |
| Thames Valley | – | – | – | – | 0 |
| Sussex, Surrey & Kent | – | – | – | – | 0 |
| Midlands & East of England | |||||
| East Midlands | – | – | 1 | – | 1 |
| South Midlands & Hertfordshire | – | – | – | – | 0 |
| Anglia & Essex | – | – | – | – | 0 |
| West Midlands | – | 2 | 1 | – | 3 |
| London Integrated Region | |||||
| London | – | 3 | 1 | – | 4 |
| Public Health Wales | |||||
| Mid & West Wales | – | – | – | – | 0 |
| North Wales | – | – | – | – | 0 |
| South East Wales | – | – | – | – | 0 |
| Miscellaneous | |||||
| Other | – | – | – | – | 0 |
| Not known | – | – | – | – | 0 |
| Total | – | 8 | 4 | 1 | 13 |
This report was published in Health Protection Report volume 9 issue 12.