Laboratory reports of respiratory infections made to CIDSC from PHE and NHS laboratories in England and Wales: weeks 23 to 26, 2015
Updated 12 January 2016
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Data are recorded by week of report, but include only specimens taken in the last 8 weeks (ie recent specimens).
1. Table 1. Reports of influenza infection made to CIDSC, by week of report
| Week | Week 23 | Week 24 | Week 25 | Week 26 | Total |
|---|---|---|---|---|---|
| Week ending | 7/6/2015 | 14/6/2015 | 21/6/2015 | 28/6/2015 | |
| Influenza A | 7 | 8 | 19 | 8 | 42 |
| Isolation | – | – | – | 1 | 1 |
| DIF * | – | – | 1 | – | 1 |
| PCR | 5 | 5 | 10 | 4 | 24 |
| Other † | 2 | 3 | 8 | 3 | 16 |
| Influenza B | 29 | 54 | 18 | 6 | 107 |
| Isolation | 4 | – | 2 | – | 6 |
| DIF * | 4 | 8 | 5 | – | 17 |
| PCR | 19 | 44 | 5 | 5 | 73 |
| Other † | 2 | 2 | 6 | 1 | 11 |
* DIF = Direct Immunofluorescence.
† Other = “Antibody detection - single high titre” or “Method not specified”.
2. Table 2. Respiratory viral detections by any method (culture, direct immunofluorescence, PCR, four-fold rise in paired sera, single high serology titre, genomic, electron microscopy, other method, other method unknown), by week of report
| Week | Week 23 | Week 24 | Week 25 | Week 26 | Total |
|---|---|---|---|---|---|
| Week ending | 7/6/2015 | 14/6/2015 | 21/6/2015 | 28/6/2015 | |
| Adenovirus* | 106 | 84 | 90 | 90 | 370 |
| Coronavirus | 7 | 6 | 3 | 4 | 20 |
| Parainfluenza† | 90 | 80 | 85 | 84 | 339 |
| Rhinovirus | 233 | 202 | 196 | 184 | 815 |
| RSV | 59 | 46 | 43 | 30 | 178 |
* Respiratory samples only.
† Includes parainfluenza types 1, 2, 3, 4 and untyped.
3. Table 3. Respiratory viral detections by age group: weeks 23 to 26, 2015
| Age group (years) | <1 year | 1-4 years | 5-14 years | 15-44 years | 45-64 years | ≥65 years | Unknown | Total |
|---|---|---|---|---|---|---|---|---|
| Adenovirus * | 71 | 79 | 29 | 112 | 54 | 25 | – | 370 |
| Coronavirus | – | 3 | 1 | 5 | 6 | 5 | – | 20 |
| Influenza A | 2 | 1 | 3 | 8 | 15 | 19 | – | 48 |
| Influenza B | 5 | 10 | 7 | 24 | 28 | 32 | – | 106 |
| Parainfluenza † | 61 | 56 | 16 | 49 | 85 | 71 | 1 | 339 |
| Respiratory syncytial virus | 61 | 27 | 16 | 16 | 21 | 36 | 1 | 178 |
| Rhinovirus | 250 | 154 | 91 | 139 | 103 | 75 | 3 | 815 |
* Respiratory samples only.
† Includes parainfluenza types 1, 2, 3, 4 and untyped.
4. Table 4. Laboratory reports of infections associated with atypical pneumonia, by week of report
| Week | Week 23 | Week 24 | Week 25 | Week 26 | Total |
|---|---|---|---|---|---|
| Week ending | 7/6/2015 | 14/6/2015 | 21/6/2015 | 28/6/2015 | |
| Coxiella burnettii | – | – | – | – | – |
| Respiratory Chlamydia sp.* | 2 | 3 | 2 | – | 7 |
| Mycoplasma pneumoniae | 13 | 5 | 7 | – | 25 |
| Legionella sp. | 3 | 8 | 12 | 12 | 35 |
* Includes Chlamydia Psittaci, Chlamydia Pneumoniae, and Chlamydia sp detected from blood, serum, and respiratory specimens.
5. Table 5. Laboratory reports of Legionnaires Disease cases in England and Wales, by week of report
| Week | Week 23 | Week 24 | Week 25 | Week 26 | Total |
|---|---|---|---|---|---|
| Week ending | 7/6/2015 | 14/6/2015 | 21/6/2015 | 28/6/2015 | |
| Nosocomial | – | – | 2 | – | 2 |
| Community | 1 | 3 | 3 | 2 | 9 |
| Travel abroad | 2 | 5 | 6 | 10 | 23 |
| Travel UK | – | – | 1 | – | 1 |
| Total | 3 | 8 | 12 | 12 | 35 |
| Male | 1 | 5 | 9 | 9 | 24 |
| Female | 2 | 3 | 3 | 3 | 11 |
Thirty-five cases were reported with pneumonia. Twenty-four males aged 36 to 89 years and 11 females aged 33 to 86 years. Nine cases had community-acquired infection and two cases were reported to be associated with hospital/healthcare facilities. Two deaths were reported in males aged 79 and 86 years.
Twenty-four cases were reported with travel association: China (1), Croatia (1), Cruise (1), Cruise/France/Italy/Spain (1), Greece (2), Greece/Turkey (1), Greece/United Kingdom (1), India (1), Italy (2), Pakistan (1), Portugal (2), Spain (4), Turkey/United Kingdom(1), United Arab Emirates (2), United Kingdom (1) and United States of America (2).
6. Table 6. Laboratory reports of Legionnaires Disease cases in England and Wales, by PHE Centre: weeks 23 to 26, 2015
| Region/Country | Nosocomial | Community | Travel Abroad | Travel UK | Total |
|---|---|---|---|---|---|
| North of England | |||||
| North East | – | 1 | 4 | - | 5 |
| Cheshire & Merseyside | – | – | 1 | – | 1 |
| Greater Manchester | – | – | 2 | – | 2 |
| Cumbria & Lancashire | – | – | 1 | – | 1 |
| Yorkshire & the Humber | 1 | – | 3 | – | 4 |
| South of England | |||||
| Devon, Cornwall & Somerset | – | – | 1 | – | 1 |
| Avon, Gloucestershire & Wiltshire | – | – | 2 | – | 2 |
| Wessex | – | 1 | 1 | 1 | 3 |
| Thames Valley | – | – | 1 | – | 1 |
| Sussex, Surrey & Kent | – | – | 1 | – | 1 |
| Midlands & East of England | |||||
| East Midlands | 1 | 4 | 1 | – | 6 |
| South Midlands & Hertfordshire | – | 1 | – | – | 1 |
| Anglia & Essex | – | 1 | 1 | – | 2 |
| West Midlands | – | 1 | 3 | – | 4 |
| London Integrated Region | |||||
| London | – | – | 1 | – | 1 |
| Public Health Wales | |||||
| Mid & West Wales | – | – | – | – | 0 |
| North Wales | – | – | – | – | 0 |
| South East Wales | – | – | – | – | 0 |
| Miscellaneous | |||||
| Other | – | – | – | – | 0 |
| Not known | – | – | – | – | 0 |
| Total | 2 | 9 | 23 | 1 | 35 |
This report was published in Health Protection Report volume 9 issue 23.